Analyzing and graphing Day 135 DMRs by treatment

Well, it was interesting to look at Day 10 DMRs, so lets do it with Day 135 samples! It follows the same pattern as the day 10 analysis, just using different samples, so the code looks very familiar. This time we got 63 DMRs, 22 more than we did at Day 10.

I’m going to go through and compare Day 10 to Day 135 next, and look for location that occur in both samples.

A few example plots:

screen-shot-2017-02-01-at-11-19-46-am

screen-shot-2017-02-01-at-11-19-37-am

screen-shot-2017-02-01-at-11-19-30-am

PDF of all the plots here

Code here

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