Yaamini’s Notebook: Gonad Methylation Analysis Part 15

A revised enchilada

I tried rerunning bismark_methylation_extractor before the weekend and still got an error. Steven suggested I run the analysis on these files instead. The files were created by Steven when he tried (and failed) to replicate my error in this notebook.

The command worked! I’m not sure what the difference is between Steven’s files and my files. Understanding that difference will be important for reproducibility.

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