DML Analysis: Notes

The mRNA track includes exon and introns. The exon track just has exons. See the issue.

Next steps in analysis (from this issue):

  • Proportion CGs in exons, introns, and mRNA
  • Find DMLs and CG motifs within 1000 bp of mRNA, possibly using -iobuf with intersectBed
  • Enrichment analysis of mRNA genomic regions. Need to find specific package?