Laura’s Notebook: Analyzing MACAU results, take 2

I revisited the MACAU result again to:

  • re-do heat maps with only loci that has 10x or greater coverage
  • Generate heat maps of % methylation (and coverage >= 10x)
  • Generate PC plot using count data (>= 20x coverage)

Check out my RMarkdown notebook, 06-Analyzing MACAU results

from The Shell Game