Shelly’s Notebook: Sat. Mar. 7, 2020 Geoduck DMR GO analysis

GO Analysis of DMRs from 11/02/2019 analysis

DMRs were identified as described here: https://shellytrigg.github.io/209th-post/

Created Rmarkdown script (20200306_anno.Rmd) to perform GOseq on DMRs based on Hollie’s script (GM.Rmd).

• DMR input files:
  • ambient sample comparison DMRs
  • day 10 sample comparison DMRs
  • day 135 sample comparison DMRs
  • day 145 sample comparison DMRs
• Output files are here: https://github.com/hputnam/Geoduck_Meth/tree/master/RAnalysis/Output

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