Hawaii Gigas Methylation Analysis Part 9

Preliminary DML identification

Diploid vs. triploid

Low pH vs. ambient pH

Going forward

  1. Get WGS resequencing quote
  2. Try BS-SNPer and EpiDiverse for SNP extraction from WGBS data
  3. Investigate comparison mechanisms for samples with different ploidy in oysters and other taxa
  4. Test-run DSS and ramwas
  5. Transfer scripts used to a nextflow workflow
  6. Update methods
  7. Update results

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